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Ganesh Pandian Namasivayam

Ganesh Pandian Namasivayam

Kyoto University

Principal Investigator

Japan

Bio-inspired therapeutics, Transcription therapy, Epigenetics

ACADEMIC CAREER

NAMASIVAYAM Ganesh Pandian started his research at the Indian Institute of Technology -Madras and moved to Niigata University with a Japanese Government scholarship to complete his Ph.D. (Biosciences) in 2009. He relocated to Kyoto University as a research associate in 2010 after serving as a visiting scientific advisor in the Ushiki patent office. Ganesh is now a Principal Investigator at Kyoto University Institute for Advanced Study and Head of IN-CBI, an Indo-Japan Government Initiative, an Adjunct PI at University of Zurich, AO Research Institute (Switzerland), Rutgers University (USA), Visiting Professor at IIT-Roorkee, and a scientific advisor in ReguGene Co. Ltd.

SELECTED PUBLICATIONS
  • Targeted Delivery of Bezafibrate via Silica Nanoparticles Restores Mitochondrial Function and Reduces Oxidative Stress in Insulin-Resistant Cells. A. Jannat, et al., Ganesh N. Pandian, (2025) ACS Appl. Bio Mater., https://doi.org/10.1021/acsabm.5c00721

  • Nucleic acid-based small molecules as targeted transcription therapeutics for immunoregulation D. Bai et al., Ganesh N. Pandian, (2024) Allergy, 79, 843-860.

  • Targeted elimination of mutated mitochondrial DNA by a multi-functional conjugate capable of sequence-specific adenine alkylation. T. Hidaka et al., Ganesh N. Pandian, H. Sugiyama. (2022) CELL Chem. Biol. 29 (4), 690-695.

  • Targeted epigenetic induction of mitochondrial biogenesis enhances antitumor immunity in mouse model. M. Malinee, Ganesh N. Pandian, H. Sugiyama. (2022) CELL Chem. Biol. 29, 463-475.

  • Structural color-enhanced microfluidics. D. Qin, A. H. Gibbons, M.M. Ito, S. S. Parimalam, H. Jiang, H.E. Karahan, B. Ghalei, Ganesh N. Pandian, and E. Sivaniah. (2022) Nat. Comm. 13, e228.

  • Chemical probe-based Nanopore Sequencing to Selectively Assess the RNA modifications. S. Ramasamy et al., Ganesh N. Pandian. (2022), ACS Chem. Biol., 17, 2704-2709.

  • A near-infrared fluorogenic pyrrole–imidazole polyamide probe for live-cell imaging of telomeres. Y. Tsubono, Ganesh N. Pandian, et al., (2020) J. Am. Chem. Soc. 142, 41, 17356–17363.

  • Creation of a synthetic ligand for mitochondrial DNA sequence recognition and promoter specific transcription suppression. T. Hidaka, Ganesh N Pandian et al., (2017) J. Am. Chem. Soc. 139, 8444-8447.

WHY MY LAB?

The Namasivayam Group at Kyoto University (WPI-iCeMS) focuses on chemical biology and nanotechnology to develop programmable transcription therapies and advanced diagnostic platforms. The lab pioneers Pyrrole-Imidazole Polyamide (PIP)–based transcription factors, bezafibrate-loaded nanoscaffolds, and DNA-origami nanopores for molecular and transcriptome sequencing. With cutting-edge facilities for super-resolution imaging, nanopore sequencing, and microfluidic fabrication, the group offers strong training in epigenetic modulation, mitochondrial reprogramming, and single-molecule analysis. Through its international IN-CBI (Intelligent ChemBioInformatics) initiative, the lab connects Japan and India to promote collaborative research and nurture young scientists in precision medicine, cellular rejuvenation, and sustainable biotechnology.

Motonari Uesugi

Kyoto University

Japan

Chemical biology, Chemoproteomics, Self-assembly, Chemical immunology

Takeaki Ozawa

The University of Tokyo

Japan

Fluorescence imaging, Bioluminescence analysis, Optogenetics

Midori Arai

Keio University

Japan

Natural products chemistry, Chemical biology, Organic chemistry

Takayoshi Suzuki

The University of Osaka

Japan

Medicinal chemistry, Epigenetics, New modality

Hideaki Kakeya

Kyoto University

Japan

Natural product chemistry, Chemical biology, Medicinal chemistry

Youhei Sohma

Wakayama Medical University

Japan

Peptide chemistry, Amyloid, Catalysis

Hiroyuki Nakamura

Institute of Science Tokyo

Japan

Medicinal chemistry, Cancer therapy, Protein modification

Akio Ojida

Kyushu University

Japan

Chemical biology, Medicinal chemistry

Shinya Hagihara

RIKEN

Japan

Plant chemical biology, Sustainable agriculture, New breeding technology

Masaki Kita

Nagoya University

Japan

Chemical biology, Natural products chemistry, Bioorganic chemistry

Go Hirai

Kyushu University

Japan

Bioorganic chemistry, Organic synthesis, Glycans, Lipids

Tasuku Hirayama

Gifu Pharmaceutical University

Japan

Imaging, Fluorescent probes, Bioinorganic chemistry

Fumika Yakushiji

Nagasaki University

Japan

Chemical epigenetics, Chemical probes, Synthetic organic chemistry, Peptide, Small molecules

Ganesh Pandian Namasivayam

Kyoto University

Japan

Bio-inspired therapeutics, Transcription therapy, Epigenetics

Fumi Nagatsugi

Tohoku University

Japan

Nucleic acids chemistry, Organic chemistry, Chemical biology

Ho Jeong Kwon

Yonsei University

South Korea

Chemical biology, Chemical genomics, Chemical proteomics, Organelle interaction, Autophagy

Sun Choi

Ewha Womans University

South Korea

AI and computer-aided drug design, Computational medicinal chemistry, Drug discovery

Young-Tae Chang

POSTECH

South Korea

Chemical based aging research, Fluorescent imaging, Fluorescent probe, Cell selective probe, Reverse aging

Ja-Hyoung Ryu

UNIST

South Korea

Peptide assembly, PPI mimic, Supramolecular chemistry

Jun-Seok Lee

Seoul National University

South Korea

Fluorescent probe, Chemoproteomics, Drug mode of action

Hyun-Suk Lim

POSTECH

South Korea

Drug discovery, Targeted protein degradation, DNA-encoded library

Yan-Mei Li

Tsinghua University

China

PTMs of protein, Vaccine, cGAS-STING

Ming-Wei Wang

Research Center for Deepsea Bioresources

China

GPCR, PI3K alpha, Structural pharmacology, Drug discovery, Nanobody

Dan Yang

Westlake University

China

Disease mechanism, Fluorescent sensors, Molecular imaging, Proteomics, Drug development

YongXiang Chen

Tsinghua University

China

Protein and peptide chemistry, Protein modification, Phosphorus chemical biology, Biomedical application

Xiaoguang Lei

Peking University

China

Natural product, Chemical genetics, Drug discovery, Biosynthesis, Biocatalysis

Qian Zhao

Hong Kong Polytechnic Univeristy

China

Proteomics, Natural novel peptides, Mass spectrometry

Dehua Yang

Shanghai Institute of Materia Medica, CAS

China

GPCRs, GLP-1R, High-throughput screening, Signal transduction, Receptor pharmacology

Huan Wang

Nanjing University

China

Peptide, Protein, Enzyme, Natural product, Synthetic biology

Xin Zhang

Westlake University

China

Chemical biology, Biological chemistry, Fluorescent microscopy, Synthetic chemistry

Liyun Zhang

Nankai University

China

Synthetic biology, Biosensor, Biocatalysis

Zou Peng

Peking University

China

Proximity labeling, Voltage imaging, Neuroscience, Membraneless organelles

Fan Zhang

Fudan University

China

Rare earth luminescent nanomaterials, NIR, Biomedical analysis

Bengang Xing

The Hong Kong Polytechnic University

China

Chemical biology, Molecular probe & imaging, Bio-labeling, Molecular therapeutics, Nano-theranostics

Jing Yu

Tsinghua University

China

Biophysics, Assembly of biomacromolecules, Condensation of biomolecules

Shi-Zhong Luo

Beijing University of Chemical Technology

China

Bioactive peptide, Cell surface protein phase separation, Peptide drug, Drug delivery

Sandeep Verma

IIT Kanpur

India

Chemical neuroscience, Microfluidic devices, New antibiotics

Govindaraju Thimmaiah

JNCASR

India

Neurodegenerative diseases, Redox biology, Ferroptosis and cuproptosis, Neuroinflammation, Theranostics (diagnostic therapy)

Eylon Yavin

The Hebrew University

Israel

PNA, RNA sensors, Antisense, Fluorogenic dyes

Micha Fridman

Tel Aviv University

Israel

Antimicrobial agents, Fluorescent antifungal probes, Drug resistance and tolerance, Subcellular localization of small molecules

Doron Shabat

Tel Aviv University

Israel

Chemiluminsence, Molecular sensores, Bioorganic chemistry

Yuval Ebenstein

Tel Aviv University

Israel

Genomics and epigenetics, Fluorescence microscopy, Diagnostics

Amir Goldbourt

Tel Aviv University

Israel

Solid state nuclear magnetic resonance, Structural virology, NMR methods and developments

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